Mammalian Genetics

BIMS 808 4/18/03

Pearson-White, sp3i@virginia.edu

 

Adult stem cells, hematopoietic and non-hematopoietic:

 

 

“Dolly”

     cloned by somatic cell nuclear transfer

     Adult nucleus put into Go phase in culture, transplanted into enucleated egg

     Nucleus from Finn Dorset into egg from Scottish Blackface

     made a viable lamb (1997) (and many nonviable lambs and embryos)

     Showed that irreversible modifications do not always occur to the genome in somatic cells

 

Cloning various species June 2000

from Clones, a hard act to follow Science 288:1722 (2000)

 

SCNT=somatic cell nuclear transfer

PUBLISHED LIVE BIRTHS FROM NUCLEAR TRANSFER IN MAMMALS:

Species Cell type Nuclear transfers
(% embryos formed)
Live births/
Number transferred
(%) Transgenic
donor?

Cow

       
Adult granulosa 552 (69) 10/100 (10) No
Fetal fibroblast 276 (12) 4/28 (14.3) Yes
Adult cumulus 47 (38) 5/6 (83) No
Adult oviduct epithelial 94(21) 3/4 (75) No
Fetal fibroblast 174 (20) 2/7 (29) No
Fetal germ cell 85 (?) 1   No
Adult fibroblast ? (?) 1   No
Adult fibroblast 338 (30) 6/54 (11) No
Adult muscle 346 (21) 4/26 (15) No

Goat

       
Fetal fibroblast 71 (68) 1/47 (2.1) Yes
Fetal fibroblast 54 (76) 2/38 (5.3) Yes

Sheep

       
Adult
mammary gland
227 (12) 1/29 (3.4) No
Fetal fibroblast 172 (27) 3/40 (7.5) No
Embryonic
epithelial-like
385 (33) 4/87 (4.6) No
Fetal fibroblast 507 (13.6) 6/62 (9.7) Yes
Embryonic
epithelial-like
128 (24.2) 2/31 (6.5) No
Embryonic
epithelial-like
258 (17) 1/44 (2.3) No
Embryonic
epithelial-like
176 (14.8) 4/26 (15.4) No
Embryonic
epithelial-like
68(11.7) 1/8 (12.5) No

Mice

       
Adult cumulus 2468 (56) 16/1385 (1.2) No
Adult fibroblast 250 (39) 1/97 (1.0) No
Adult fibroblast 467 (38) 2/177 (1.1) No

Copy cat (Cc): Nuclear-donor cat (left), and cloned kitten with its surrogate mother.

from Nature 415:859 (2002) Shin et. al.

a, Adult female cat that supplied cumulus cells for nuclear transplantation. The cells were cultured in DMEM/F12 medium for 5 days at 37 °C until confluent; micromanipulation was used to enucleate ova obtained after routine ovariohysterectomy and to transfer the donor's cumulus cells into the perivitelline space. Enucleated ova and cumulus cells were fused by electrofusion; a second electropulse was applied to activate the oocytes. b, The surrogate mother, a synchronized recipient of three cloned embryos, produced one cloned kitten, which was delivered by caesarian section 66 days after embryonic transfer.

 

 

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Clone health

    Apparently normal clones, enlarged placentas

    Can develop adult obesity, mice from cumulus cells

    Can develop telomere elongation

    New study adds hepatic health and immune impairment to the list, but not obesity from Sertoli cell nuclei

ES cell derived mice at term (right)
The pup and placenta on the left are derived from tetraploid embryo complementation and appear grossly normal. In contrast, the pup on the right, derived by nuclear transfer of the same ES cell line, shows a dramatic example of the commonly observed overgrowth phenotype seen in cloned mice. Extensive fetal and placental overgrowth are observed accompanied by edema, and this animal did not survive. Scale bars, 1 cm. [from Eggan et al. (55); copyright 2001 National Academy of Sciences, U.S.A.]

ES cell donor nuclei were not successful if inbred, but effective if hybrid. Adult donor nuclei made blastocysts readily, but continued to newborn and adult at lower frequency than hybrid ES cells.

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from Lanza RP et al Science 288:665 (2000)

Normal heifers cloned from senescent somatic cells. (A) CL53-8, CL53-9, CL53-10, CL53-11, and CL53-12 (nicknamed Lily, Daffodil, Crocus, Forsythia, and Rose, respectively) at 5 months of age and (B) CL53-1 (Persephone) at 10 months of age. Fig. 2

Ability of nuclear transfer to restore the proliferative life-span of senescent donor cells. (A) The growth curve of the original BFF cell strain (green) is compared with that of cells derived from the fetus (ACT99-002) (black) that was cloned from late-passage BFF cells (CL53 cells). (B) The growth curve of the CL53 donor cells demonstrating that the cultures had about two population doublings (PDs) remaining. (C) Late-passage CL53 cells (n = 97) were seeded at clonal density, and the proliferative capacity after 1 month was determined. (D) Single-cell clones from early-passage BFF cultures (original) and early-passage ACT99-002 (clone) showed a capacity for extended proliferation.

Fig. 3 from Lanza RP et al Science 288:665 (2000)

Fig. 4 from Lanza RP et al Science 288:665 (2000)
Telomere length analysis. (A) Nucleated blood cells. Peripheral blood samples from cloned and control Holsteins were analyzed by flow FISH (34) in two separate blinded experiments. Duplicate samples (red and blue bars) of nucleated cells obtained after osmotic lysis of red cells with ammonium chloride were analyzed by flow FISH as described (33). The average telomere fluorescence of gated single cells was calculated by subtracting the mean background fluorescence from the mean fluorescence obtained with the FITC-labeled telomere probe. (B) Telomere lengths in nucleated blood cells of 25 normal Holsteins ranging from <2 weeks to 6 years of age, showing the decline in mean telomere lengths against age. (C) Elongation of telomeres in cells upon nuclear transfer. Terminal restriction fragment (TRF) analysis of DNA fragments obtained after digestion with Hinf I-Rsa I was performed on a 0.5% agarose gel run for 28 hours, as described (Telomere Length Assay Kit; Pharmingen, San Diego, California). Lanes 1 and 4, genomic DNA isolated from control cells (pretransfection BFF bovine fibroblasts) (mean TRF length = 18.3 kb); lanes 2 and 5, senescent CL53 cells (mean TRF length = 15.2 kb); lanes 3 and 6, fibroblasts from a 7-week-old cloned fetus (ACT99-002) obtained by nuclear transfer with senescent CL53 cells (mean TRF length = 20.1 kb) (lanes 4 to 6 are longer exposures of lanes 1 to 3); lane 7, senescent donor fibroblast clone 22-1 (mean TRF length = 14.4 kb); lane 8, nuclear transfer fetal fibroblasts obtained with senescent 22-1 cells (mean TRF length = 16.4 kb); lane 9, senescent fibroblast clone 25-1 (mean TRF length = 12.1 kb); and lane 10, nuclear transfer fetal fibroblasts obtained with senescent 25-1 cells (mean TRF length = 16.1 kb).

 

Telomerase is expressed in reconstructed embryos but not in donor bovine fibroblasts. Telomerase activity was measured with a TRAP assay kit (Pharmingen, San Diego, California). Lysates from adult donor senescent (CL53) fibroblasts and day 7 reconstructed bovine embryos (n = 15) were obtained and used in the TRAP assay. Lane 1, extract from 4000 K562 human erythroleukemia cell line cells; lane 2, 20-base pair ladder; lane 3, no cell extract; lane 4, heat-treated embryo (n = 1) extract; lane 5, embryo extract (n = 10); lane 6, n = 1; lane 7, n = 0.1; lane 8, n = 0.01; and lane 9, extract from 4000 donor CL53 fibroblasts. All lanes contain the internal control TRAP reaction (36 base pairs, arrow)

Fig. 5 from Lanza RP et al Science 288:665 (2000)

 

 

Early death of mice cloned from somatic cells

    Cloned 12 male mice from immature Sertoli cells in March-September 1999

    Genetic background F1 between C57BL/6xDBA/2: B6D2F1

    Natural mating n=7 or spermatid injection n=6 controls

Mouse clone characteristics

     Weight gain 53.7 ± 9.7 g clones, 51.6 ± 5.7 g (p<0.05) at one year

     LDH and ammonium levels elevated in clones

     Normal total protein, albumin, glucose, GPT, GOT, BUN, total cholesterol, triglyceride, alkaline phosphatase, creatinine, bilirubin, amylase, calcium, and creatine phosphokinase

Early death of cloned mice, survival curve

From Nature Genetics 30:253 (2002)
Ogonuki N … Ogura, Atsuo,

 

Cloned mice died 311-750 d

    Pneumonia 6/6

    Liver necrosis 4/6

    Tumors (leukemia, lung cancer 1/6 each)

    Cloned bovines and goats have malfunctioning immune systems

From Nature Genetics 30:253 (2002) Ogonuki N … Ogura, Atsuo,

 

From Nature Genetics 30:253 (2002) Ogonuki N … Ogura, Atsuo,

 

Are adult nuclei suitable for generating clones?

    Somatic cell nuclear transfer was initiated 40 years ago to answer this question in amphibians (John Gurdon)

  tadpole intestinal epithelial cells or adult skin cells

  Produced tadpoles but no frogs

    Obtained adult mammals, but at low frequency

 

Heritable mark to identify differentiated donor nuclei

     Immune system lymphocytes are ideal because of genome rearrangement, monoclonality of each mature antibody-producing (B) or TCR-expressing (T) cell

     Lymphocytes are recalcitrant to nuclear reprogramming

   Only 4% get to blastocysts

   Transfer to uterus not successful at producing live mice

   So they went through ES cell stage, and tetraploid complementation

 

Hochedlinger and Jaenisch Nature 415:1035 (2002)

Hochedlinger and Jaenisch Nature 415:1035 (2002)

Development of cloned embryos

LN1

    B lymphocyte

    Had immunoglobulin gene rearrangements

    Generated viable mice with rearranged immunoglobulin gene in all tissues

LN2

    From T cell nucleus

    Had rearranged T cell receptor

    Produced no live mice

  One dead fetus

–ES cells from LN2 line could contribute to several tissues when combined in chimeras with wild type cells, including immune system

Generation of mice

Study does not conclusively show that adult nuclei can be reprogrammed to allow normal development

    ES cell intermediate stage may have allowed reprogramming

    Tetraploid complementation by-passed placental tissue formation by cloned nuclei

  Placental defects are a problem in cloned mammals

    Number of live offspring still very low - 0.1%

Do adult tissues need to contain stem cells to produce nuclear transfer clones?

    Stem cell-containing tissues are more efficient

    ES cells are best of all

Sources of variability

    Inbred vs. F1 mice

    Fusion (Dolly) vs. microinjection

    ES cells as nuclear donors, anomalous

Reprogramming in normal development renders the egg and sperm genome competent to express embryonic genes

 

Methylation reprogramming in the germ line:

 

What about therapeutic cloning?

    Obtained only 35 ES cell lines from >1000 nuclear transfers (3.4%)

    This low efficiency will not be acceptable in humans, where eggs are scarce