People

Principal Investigator

Michael Shirts
ude.ainigriv@strihs.leahcim

Education:
Ph.D. Stanford University (2005)
A.B. Harvard University (1999)

Research:
Computer simulations of molecular phenomena, molecular property prediction, improving utility and reliability of simulation software, materials design in biological and soft condensed matter systems.

CV: Full

Graduate Students

Himanshu Paliwal
ude.ainigriv@p4th

Education:
Ph.D. University of Virginia (Candidate)
B.Tech. ITBHU (2006)

Research:
Comparison and standardization of free energy methodologies for chemical design

Kai Wang
ude.ainigriv@rc8wk

Education:
Ph.D. University of Virginia (Candidate)
B.S. East China School of Science and Technology (2009)

Research:
Drug resistance and receptor flexibility

Joe Basconi
ude.ainigriv@mq2bj

Education:
Ph.D. University of Virginia (Candidate)
B.S. University of Notre Dame (2009)

Research:
Protein transport in chromatograpic materials

Levi Naden
ude.ainigriv@cd8nl

Education:
Ph.D. University of Virginia (Candidate)
B.S. Kansas State University (2010)

Research:
Molecular design methods

Brittany Zimmerman
ude.ainigriv@ru9zsb

Education:
Ph.D. University of Virginia (Candidate)
B.S. University of Tulsa (2012)

Research:
Force field parameterization and simulation of solids

Undergraduate Students

Arjan Kool
ude.ainigriv@qh5kca

Education:
B.S. Chemical Engineering, University of Virginia (2013)

Research:
Simulation and design over many states

Jacob Monroe
ude.ainigriv@mb5mij

Education:
B.S. Chemical Engineering, University of Virginia (2014)

Research:
HIV drug resistance

Yanzhi Yang
ude.ainigriv@xy3yy

Education:
B.S. Chemical Engineering, University of Virginia (2014)

Research:
Protein-ligand interactions

Ellen Zhong
ude.ainigriv@zf3zde

Education:
B.S. Chemical Engineering, University of Virginia (2014)

Research:
Protein interactions with chromatographic surfaces

Mitch Slovin
ude.ainigriv@pw7srm

Education:
B.S. Chemical Engineering, University of Virginia (2015)

Research:
Dynamics on superhydrophobic surfaces

Group Alumni

Tri Pham
ude.ainigriv@a3ptt

Education:
Ph.D. Monash University (2009)
B.E.,B.Sc. University of Sydney (2004)

Research:
Optimized methods for free energy calculations and applications to viral resistance

Christoph Klein
ude.ainigriv@b3ktc

Education:
B.S. Chemical Engineering, University of Virginia (2012)

Research:
Automation of molecular design, GPU computing

Karan Mehra
ude.ainigriv@r7mkk

Education:
B.S. Chemical Engineering, University of Virginia (2012)

Research:
Interaction of proteins with chromatographic materials

Jon Fuller (Summer 2009)

Website

Education:
Ph.D. University of Leeds (2011)
B. A. University of Oxford (2006)

Research:
Design of biomimetic polymers for modulation of biological function

Walid El-Nahal

Education:
B.S. Chemical Engineering, University of Virginia (2011)

Research:
Conformational rearrangement of HIV-RT on drug binding

Michael Zhu

Education:
B.S. Chemical Engineering, University of Virginia (2011)

Research:
Automation of alchemical molecular design

Chris Lee

Education:
B.S. Chemistry and B. A. Computer Science, University of Virginia (2011)

Research:
Automation of molecular design

Graduate and Undergraduate Openings

We're a young lab, and we're gradually scaling up! Potential graduate students who are interested in the research group should contact Prof. Shirts and apply to the Chemical Engineering Ph.D. program at the University of Virginia. In some cases, admission through other departments may be possible. Students interested in undergraduate research opportunities in the lab should contact Prof. Shirts directly.

Postdoctoral Opening

I am not anticipating having additional funding for postdoctoral research associates before summer of 2013.